PDBx/mmCIF
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Data Category pdbx_validate_rmsd_bond

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General

Category name
pdbx_validate_rmsd_bond
Required in PDB entries
no
Category group membership
pdbx_group  validate_group
Used in current PDB entries
Yes, in about 17.7 % of entries

Category Relationship Diagrams

70
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70
View abbreviated category relationship diagram including only those categories used in current PDB entries.

Category Description 

    Data items in the PDBX_VALIDATE_RMSD_BOND category list the
    covalent bonds that have values which deviate from expected
    values by more than 6*rmsd.

Category Example

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loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.linker_flag
 1   0  A   CD   LYS    152  .  .    A   CE   LYS    152  .  .      -0.372     1.136  N
 2   0  A   CG   GLU    166  .  .    A   CD   GLU    166  .  .      -0.622     0.893  N

Key Data Items

Category Data Items

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