PDBx/mmCIF
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Data Category pdbx_validate_polymer_linkage

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General

Category name
pdbx_validate_polymer_linkage
Required in PDB entries
no
Category group membership
pdbx_group  validate_group
Used in current PDB entries
Yes, in about 2.3 % of entries

Category Relationship Diagrams

70
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70
View abbreviated category relationship diagram including only those categories used in current PDB entries.

Category Description 

    Data items in the PDBX_VALIDATE_POLYMER_LINKAGE category list the
    polymer linkages within the entry that are outside of typlical 
    covalent distances.

Category Example

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loop_
_pdbx_validate_polymer_linkage.id
_pdbx_validate_polymer_linkage.PDB_model_num
_pdbx_validate_polymer_linkage.auth_atom_id_1
_pdbx_validate_polymer_linkage.auth_asym_id_1
_pdbx_validate_polymer_linkage.auth_comp_id_1
_pdbx_validate_polymer_linkage.auth_seq_id_1
_pdbx_validate_polymer_linkage.PDB_ins_code_1
_pdbx_validate_polymer_linkage.label_alt_id_1
_pdbx_validate_polymer_linkage.auth_atom_id_2
_pdbx_validate_polymer_linkage.auth_asym_id_2
_pdbx_validate_polymer_linkage.auth_comp_id_2
_pdbx_validate_polymer_linkage.auth_seq_id_2
_pdbx_validate_polymer_linkage.PDB_ins_code_2
_pdbx_validate_polymer_linkage.label_alt_id_2
_pdbx_validate_polymer_linkage.dist
   1     1     .  B  VAL    107  .  .       .  B  ARG    108  .  .         3.16
   2     1     .  B  ARG    110  .  .       .  B  LYS    110  .  .         2.95

Key Data Items

Category Data Items

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