Average Fourier Shell Correlation (avgFSC) between model and
observed structure factors for reflections included in refinement.
The average FSC is a measure of the agreement between observed
and calculated structure factors.
sum(Ni FSCwork-i)
avgFSCwork = ---------------------
sum(Ni)
Ni = the number of working reflections in the resolution shell i
FSCwork-i = FSC for working reflections in the i-th resolution shell calculated as:
(sum(|Fo| |Fc| fom cos(phic-phio)))
FSCwork-i = -------------------------------------------
(sum(|Fo|2) (sum(|Fc|2)))1/2
|Fo| = amplitude of observed structure factor
|Fc| = amplitude of calculated structure factor
phio = phase of observed structure factor
phic = phase of calculated structure factor
fom = figure of merit of the experimental phases.
Summation of FSCwork-i is carried over all working reflections in the resolution shell.
Summation of avgFSCwork is carried over all resolution shells.
Ref: Rosenthal P.B., Henderson R.
"Optimal determination of particle orientation, absolute hand,
and contrast loss in single-particle electron cryomicroscopy.
Journal of Molecular Biology. 2003;333(4):721-745, equation (A6).